Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Debug: download embedding columns #23

Merged
merged 3 commits into from
Apr 6, 2023
Merged

Debug: download embedding columns #23

merged 3 commits into from
Apr 6, 2023

Conversation

TanakaAkihiro
Copy link
Collaborator

No description provided.

@TanakaAkihiro TanakaAkihiro requested a review from juntyr March 27, 2023 15:35
@juntyr
Copy link
Collaborator

juntyr commented Mar 28, 2023

Unfortunately this does not yet solve the issue with re-uploading data+plots where a plot depends on xiplot-generated PCA embeddings

Copy link
Collaborator

@juntyr juntyr left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

The bug still persists - perhaps look at how the clusters are saved during downloading and adapt that for the extra embedding columns

@TanakaAkihiro
Copy link
Collaborator Author

Hope that this time the fix works :)

@juntyr

@juntyr juntyr self-requested a review April 5, 2023 08:51
Copy link
Collaborator

@juntyr juntyr left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM

@juntyr juntyr requested a review from Aggrathon April 5, 2023 08:51
@juntyr juntyr mentioned this pull request Apr 5, 2023
@Aggrathon
Copy link
Member

Storing the PCA data as strings instead of numbers is a bit strange

@TanakaAkihiro
Copy link
Collaborator Author

It seems like cluster data is also stored as strings... I'll merge this one and we could fix it later, if it's fine

@TanakaAkihiro TanakaAkihiro merged commit b1d5584 into main Apr 6, 2023
@juntyr juntyr deleted the Embedding-debug branch April 10, 2023 11:59
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants