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jenkins build failure - time to pause or discontinue this workflow? #964

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prjemian opened this issue Dec 17, 2021 · 3 comments · Fixed by #1287
Closed

jenkins build failure - time to pause or discontinue this workflow? #964

prjemian opened this issue Dec 17, 2021 · 3 comments · Fixed by #1287
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@FreddieAkeroyd @PeterC-DLS
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documentation question
Milestone
NXDL 2025

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@prjemian
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With the recent merge of #960, the GitHub actions workflow was successful yet the jenkins workflow failed.

```bash Changes:

[peter.chang] Remove python 3.6 from CI for #952

[peter.chang] Add python 3.10 to CI

[...truncated 1.71 MB...]
[]\T1/qtm/m/n/10 \spxentrytransformations\spxextrabase class, \T1/qtm/m/it/10 s
ee \T1/qtm/m/n/10 NX-
! Undefined control sequence.
\spxpagem

l.2330 \hyperindexformat{\spxpagem}{280}

! Undefined control sequence.
\spxpagem

l.2374 ...gory}, \hyperindexformat{\spxpagem}{156}

Underfull \hbox (badness 10000) in paragraph at lines 2384--2386
[]\T1/qtm/m/n/10 \spxentryunit_cell_alphabetagamma\spxextrafield, [][]256[][],
! Undefined control sequence.
\spxpagem

l.2399 \hyperindexformat{\spxpagem}{46}
, \hyperpage{131}
! Undefined control sequence.
\spxpagem

l.2411 \hyperindexformat{\spxpagem}{281}

! Undefined control sequence.
\spxpagem

l.2413 \hyperindexformat{\spxpagem}{45}
, \hyperpage{156}
! Undefined control sequence.
\spxpagem

l.2418 ...ation}, \hyperindexformat{\spxpagem}{75}
,
! Undefined control sequence.
\spxpagem

l.2421 \hyperindexformat{\spxpagem}{155}

! Undefined control sequence.
\spxpagem

l.2423 \hyperindexformat{\spxpagem}{155}

! Undefined control sequence.
\spxpagem

l.2425 \hyperindexformat{\spxpagem}{155}

! Undefined control sequence.
\spxpagem

l.2433 \hyperindexformat{\spxpagem}{26}

! Undefined control sequence.
\spxpagem

l.2448 \hyperindexformat{\spxpagem}{282}

! Undefined control sequence.
\spxpagem

l.2449 ...ation}, \hyperindexformat{\spxpagem}{75}

[473]
Underfull \hbox (badness 10000) in paragraph at lines 2474--2476
[]\T1/qtm/m/n/10 \spxentrywavelength_indices\spxextragroup at-tribute,

Underfull \hbox (badness 10000) in paragraph at lines 2508--2510
[]\T1/qtm/m/n/10 \spxentryx_rotation_axis_pixel_position\spxextrafield,
! Undefined control sequence.
\spxpagem

l.2514 \hyperindexformat{\spxpagem}{372}

! Undefined control sequence.
\spxpagem

l.2517 \hyperindexformat{\spxpagem}{374}

Underfull \hbox (badness 10000) in paragraph at lines 2515--2518
[]\T1/qtm/m/n/10 \spxentryxasproc\spxextraapplication def-i-ni-tion, \T1/qtm/m/
it/10 see
! Undefined control sequence.
\spxpagem

l.2520 \hyperindexformat{\spxpagem}{376}

Underfull \hbox (badness 10000) in paragraph at lines 2518--2521
[]\T1/qtm/m/n/10 \spxentryxbase\spxextraapplication def-i-ni-tion, \T1/qtm/m/it
/10 see
! Undefined control sequence.
\spxpagem

l.2523 \hyperindexformat{\spxpagem}{379}

Underfull \hbox (badness 10000) in paragraph at lines 2521--2524
[]\T1/qtm/m/n/10 \spxentryxeuler\spxextraapplication def-i-ni-tion, \T1/qtm/m/i
t/10 see
! Undefined control sequence.
\spxpagem

l.2526 \hyperindexformat{\spxpagem}{380}

Underfull \hbox (badness 10000) in paragraph at lines 2524--2527
[]\T1/qtm/m/n/10 \spxentryxkappa\spxextraapplication def-i-ni-tion, \T1/qtm/m/i
t/10 see
! Undefined control sequence.
\spxpagem

l.2529 \hyperindexformat{\spxpagem}{382}

Underfull \hbox (badness 10000) in paragraph at lines 2527--2530
[]\T1/qtm/m/n/10 \spxentryxlaue\spxextraapplication def-i-ni-tion, \T1/qtm/m/it
/10 see
! Undefined control sequence.
\spxpagem

l.2532 \hyperindexformat{\spxpagem}{383}

Underfull \hbox (badness 10000) in paragraph at lines 2530--2533
[]\T1/qtm/m/n/10 \spxentryxlaueplate\spxextraapplication def-i-ni-tion, \T1/qtm
/m/it/10 see
! Undefined control sequence.
\spxpagem

l.2539 \hyperindexformat{\spxpagem}{384}

! Undefined control sequence.
\spxpagem

l.2542 \hyperindexformat{\spxpagem}{284}

! Undefined control sequence.
\spxpagem

l.2545 \hyperindexformat{\spxpagem}{385}

Underfull \hbox (badness 10000) in paragraph at lines 2546--2548
[]\T1/qtm/m/n/10 \spxentryxsi:schemaLocation\spxextraNXDL at-tribute,

Underfull \hbox (badness 10000) in paragraph at lines 2564--2566
[]\T1/qtm/m/n/10 \spxentryy_rotation_axis_pixel_position\spxextrafield,
[474]) (./nexus.aux) )
(see the transcript file for additional information){/usr/share/texlive/texmf-d
ist/fonts/enc/dvips/tex-gyre/q-ts1.enc}{/usr/share/texlive/texmf-dist/fonts/enc
/dvips/tex-gyre/q-ec.enc}{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r
.enc}</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb><
/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb></usr/s
hare/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/te
xlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi7.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texlive/texmf-di
st/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/texlive/texmf-dist/fonts
/type1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1
/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fonts/type1/public
/tex-gyre/qhvb.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/tex-gyre/q
hvbi.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/tex-gyre/qhvr.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/tex-gyre/qtmb.pfb></usr/share/t
exlive/texmf-dist/fonts/type1/public/tex-gyre/qtmbi.pfb></usr/share/texlive/tex
mf-dist/fonts/type1/public/tex-gyre/qtmr.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/tex-gyre/qtmri.pfb></usr/share/texlive/texmf-dist/fonts/type1/p
ublic/txfonts/t1xbtt.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/txfo
nts/t1xtt.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/txfonts/t1xtt.p
fb></usr/share/texlive/texmf-dist/fonts/type1/public/txfonts/tcxtt.pfb></usr/sh
are/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb>
Output written on nexus.pdf (478 pages, 4934976 bytes).
Transcript written on nexus.log.

2021-12-17 21:14:17 (16.7 MB/s) - ‘https://build.nexusformat.org/job/definitions-master/ws/build/dist/pdf/NeXusIntern.pdf%E2%80%99 saved [91918/91918]

2021-12-17 21:14:18 (24.9 MB/s) - ‘https://build.nexusformat.org/job/definitions-master/ws/build/dist/pdf/NXtranslate.pdf%E2%80%99 saved [222289/222289]

  • cp -fr html/applying-nexus.html html/authorgroup.html html/classes html/colophon.html html/community.html html/copyright.html html/datarules.html html/defs_intro.html html/design.html html/docs_about.html html/_downloads html/examples html/faq.html html/fileformat.html html/genindex.html html/github.html html/history.html html/_images html/index.html html/installation.html html/introduction.html html/introduction-napi.html html/issues.html html/mailinglist.html html/motivations.html html/napi-c.html html/napi-f77.html html/napi-f90.html html/napi.html html/napi-idl.html html/napi-java.html html/niac.html html/nxdl_desc.html html/nxdl.html html/nxdl-types.html html/objects.inv html/preface.html html/ref_doc.html html/revhistory.html html/rules.html html/search.html html/searchindex.js html/_sources html/_static html/strategies.html html/user_manual.html html/utilities.html html/validation.html https://build.nexusformat.org/job/definitions-master/ws/build/dist
  • cd ../../..
  • cp -fr /isis/www/nexus/doxygen https://build.nexusformat.org/job/definitions-master/ws/build/dist
  • cd impatient-guide
  • cp -f _build/latex/NXImpatient.pdf https://build.nexusformat.org/job/definitions-master/ws/build/dist/pdf/NXImpatient.pdf
  • cp -rf _build/html https://build.nexusformat.org/job/definitions-master/ws/build/dist/impatient
  • cd https://build.nexusformat.org/job/definitions-master/ws/build/dist
  • git add .
    warning: CRLF will be replaced by LF in _downloads/0a877a94f6f32b982b9a0c74073f6f01/write_nexus_file2.py.
    The file will have its original line endings in your working directory
    warning: CRLF will be replaced by LF in _downloads/464bd71626b8a660aadb9fc6cb05ae82/FDL.
    The file will have its original line endings in your working directory
    warning: CRLF will be replaced by LF in _downloads/dfc22f4a37f3414e5e8cc7135510b802/write_nexus_file.py.
    The file will have its original line endings in your working directory
    warning: CRLF will be replaced by LF in examples/epics/tree_structure.txt.
    The file will have its original line endings in your working directory
    warning: CRLF will be replaced by LF in examples/epics/write_nexus_file.py.
    The file will have its original line endings in your working directory
    warning: CRLF will be replaced by LF in examples/epics/write_nexus_file2.py.
    The file will have its original line endings in your working directory
    warning: CRLF will be replaced by LF in examples/napi-java-jnexus.bat.
    The file will have its original line endings in your working directory
  • git commit -m 'Update docs for 041c2c0'
    [gh-pages 20436444] Update docs for 041c2c0
    168 files changed, 792 insertions(+), 793 deletions(-)
    rewrite examples/code_native.html (66%)
    rewrite searchindex.js (77%)
  • git push origin gh-pages
    remote: Permission to nexusformat/definitions.git denied to ISISBuildServer.
    fatal: unable to access 'https://github.com/nexusformat/definitions.git/': The requested URL returned error: 403
    Build step 'Execute shell' marked build as failure
    Archiving artifacts

</details>

With PR #868 & #954, is it time to pause or discontinue the jenkins workflow?

Discussed at the recent [telco](https://www.nexusformat.org/Telco_20211215.html)
@prjemian prjemian added this to the NXDL 2022.03 milestone Dec 17, 2021
@prjemian prjemian mentioned this issue Dec 17, 2021
Closed
@PeterC-DLS
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Grepping the build directory shows \spxpagem is only used in the index and defined in

build/manual/build/latex/python.ist:\\let\\spxpagem \\sphinxstyleindexpagemain

So perhaps some compatibilty issue with makeindex and sphinxlatexindbibtoc.sty or a missing file?

A quick google shows it has occurred previously: https://lists.nexusformat.org/pipermail/nexus-buildserver/2020-January/000142.html and https://lists.nexusformat.org/pipermail/nexus-buildserver/2020-January/000144.html

Also https://www.mail-archive.com/[email protected]/msg08351.html suggests the jenkins build script should be using the Makefile which uses latexmk.

@prjemian
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Not necessary to resolve this for release of NXDL now.

@prjemian
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No work on this issue at 2022-06 code camp.

@prjemian prjemian modified the milestones: NXDL 2022.06, NXDL 2023.06 Jun 23, 2022
@prjemian prjemian mentioned this issue Sep 30, 2024
Merged
@prjemian prjemian moved this to In Progress in NIAC 2024 project Sep 30, 2024
@github-project-automation github-project-automation bot moved this from In Progress to Done in NIAC 2024 project Sep 30, 2024
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Assignees

@FreddieAkeroyd FreddieAkeroyd

@PeterC-DLS PeterC-DLS

Labels
documentation question
Projects
NIAC 2024 project
Status: Done
Milestone
NXDL 2025
Development

Successfully merging a pull request may close this issue.

Remove www directory as NAPI is no longer distributed (fixes #1274) nexusformat/definitions
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@FreddieAkeroyd @PeterC-DLS @prjemian