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    92 repositories

    • compi-rnaseq-pipeline

      Public
      A compi RNA-Seq pipeline to perform differential expression.
      rna-seqpipelinedifferential-expressioncompi
      Shell
      •
      Other
      •0•0•0•0•Updated Feb 25, 2025Feb 25, 2025

    • run-pathfindR

      Public
      An R script to run the pathfindR enrichment workflow
      R
      •
      MIT License
      •0•0•0•0•Updated Feb 21, 2025Feb 21, 2025

    • master-bioinformatica-aplicada-2024-2025

      Public
      Machine Learning in Bioinformatics class at the "Máster en Bioinformática Aplicada a Medicina Personalizada y Salud (Curso 2024-2025)
      Jupyter Notebook
      •0•0•0•0•Updated Feb 21, 2025Feb 21, 2025

    • seda-compi-pipelines

      Public
      This project provides a framework for easily creating pipelines of SEDA commands using Compi.
      Shell
      •
      MIT License
      •0•1•0•0•Updated Feb 17, 2025Feb 17, 2025

    • my-brain-seq

      Public
      myBrain-Seq: a Compi pipeline for miRNA-Seq data analysis in neuropsychiatry
      dockerpipelinedifferential-expressionmirnacompimirna-seq
      R
      •
      Other
      •1•8•6•0•Updated Feb 14, 2025Feb 14, 2025

    • sklearn-pca

      Public
      A Python script to perform PCA and generate bidimensional plots between the three first components.
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 13, 2025Feb 13, 2025

    • seda

      Public
      SEquence DAtaset builder
      javabioinformaticsfastasequencesfasta-sequencessequence-dataset-builder
      Java
      •
      GNU General Public License v3.0
      •2•5•0•4•Updated Feb 3, 2025Feb 3, 2025

    • pp-mcc-ppi-ml

      Public
      Python
      •
      Other
      •0•0•0•0•Updated Jan 29, 2025Jan 29, 2025

    • cfr-vigo-ti-2025-ml

      Public
      Cadernos de aprendizaxe automática para o curso sobre "Tecnoloxías Intelixentes" no CFR de Vigo (Xaneiro de 2025)
      Jupyter Notebook
      •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • ppi-ml

      Public
      Python
      •
      Other
      •0•0•0•0•Updated Dec 26, 2024Dec 26, 2024

    • pandrugs-frontend

      Public
      An AngularJS frontend for the PanDrugs application
      bioinformaticsdatabasecancerdrugspersonal-medicine
      HTML
      •
      GNU General Public License v3.0
      •1•3•8•0•Updated Nov 28, 2024Nov 28, 2024

    • deep-learning-colonoscopy

      Public
      Review in Deep Learning for Polyp Detection and Classification in Colonoscopy (https://doi.org/10.1016/j.neucom.2020.02.123).
      deep-neural-networkscolonoscopydeep-learning
      35•181•2•0•Updated Nov 12, 2024Nov 12, 2024

    • uniprot-id-mapping

      Public
      UniProt ID Mapping in Java
      Java
      •
      MIT License
      •0•1•0•0•Updated Jun 25, 2024Jun 25, 2024

    • pandrugs-docker

      Public
      A Dockerfile to generate an all-in-one pandrugs server
      Shell
      •3•7•1•1•Updated Jun 20, 2024Jun 20, 2024

    • strep_service

      Public
      Online preprocessor service
      Java
      •
      GNU General Public License v3.0
      •0•0•0•1•Updated Apr 4, 2024Apr 4, 2024

    • strep

      Public
      Java
      •
      GNU General Public License v3.0
      •0•0•0•3•Updated Apr 4, 2024Apr 4, 2024

    • nlpa

      Public
      Natural Language Pre-processing Architecture
      Java
      •
      GNU General Public License v3.0
      •2•0•0•4•Updated Apr 4, 2024Apr 4, 2024

    • bdp4j

      Public
      Big Data Pipelining For Java
      pipelinepipeline-frameworkjava-8
      Java
      •
      GNU General Public License v3.0
      •1•8•1•3•Updated Apr 3, 2024Apr 3, 2024

    • aedi-cubirds

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 25, 2024Mar 25, 2024

    • aedi-cinquillooro

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 25, 2024Mar 25, 2024

    • aedi-sushigo

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 25, 2024Mar 25, 2024

    • aedi-toma6

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 25, 2024Mar 25, 2024

    • AI-NLP-Financial-Analysis

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •1•0•0•0•Updated Mar 19, 2024Mar 19, 2024

    • master-bioinformatica-aplicada-2023-2024

      Public
      Machine Learning in Bioinformatics class at the "Máster en Bioinformática Aplicada a Medicina Personalizada y Salud (Curso 2023-2024)
      Jupyter Notebook
      •0•1•0•0•Updated Feb 13, 2024Feb 13, 2024

    • WARCProcessor

      Public
      WARCProcessor is a platform independent integrative tool providing specific support to scientists that need to perform experiments in the field of web spam research.
      Java
      •
      GNU Lesser General Public License v3.0
      •2•0•0•8•Updated Feb 6, 2024Feb 6, 2024

    • conceptDriftAnalyser

      Public
      Perl Tool to Analyze and Detect Concept Drift in Spam E-mails
      Perl
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Feb 5, 2024Feb 5, 2024

    • LiSBSetup

      Public
      HCL
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 25, 2024Jan 25, 2024

    • LiSB

      Public
      Roff
      •
      GNU General Public License v3.0
      •1•0•0•1•Updated Jan 25, 2024Jan 25, 2024

    • eSDRSexample

      Public
      Example of eSDRS use
      Java
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 17, 2024Jan 17, 2024

    • GC4S

      Public
      GUI Components for (Java) Swing
      guilibraryjavaswinggui-components
      Java
      •
      GNU Lesser General Public License v3.0
      •3•35•0•1•Updated Nov 23, 2023Nov 23, 2023