-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathindex.html
59 lines (57 loc) · 13.4 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
<!DOCTYPE html>
<html lang="en-US">
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width,initial-scale=1">
<title>Rcwl</title>
<meta name="generator" content="VuePress 1.9.7">
<meta name="description" content="R and Bioconductor toolchain for bioinformatics tools and workflows">
<meta name="theme-color" content="#3eaf7c">
<meta name="apple-mobile-web-app-capable" content="yes">
<meta name="apple-mobile-web-app-status-bar-style" content="black">
<link rel="preload" href="/assets/css/0.styles.2e55c9e9.css" as="style"><link rel="preload" href="/assets/js/app.78d66748.js" as="script"><link rel="preload" href="/assets/js/2.77543436.js" as="script"><link rel="preload" href="/assets/js/82.710f9413.js" as="script"><link rel="prefetch" href="/assets/js/10.687810b6.js"><link rel="prefetch" href="/assets/js/11.5949a480.js"><link rel="prefetch" href="/assets/js/12.3dcf05a7.js"><link rel="prefetch" href="/assets/js/13.7591d52c.js"><link rel="prefetch" href="/assets/js/14.b61a8e66.js"><link rel="prefetch" href="/assets/js/15.7b9230a9.js"><link rel="prefetch" href="/assets/js/16.df975473.js"><link rel="prefetch" href="/assets/js/17.25fea857.js"><link rel="prefetch" href="/assets/js/18.a4764f16.js"><link rel="prefetch" href="/assets/js/19.7c746131.js"><link rel="prefetch" href="/assets/js/20.028a35d4.js"><link rel="prefetch" href="/assets/js/21.2b63d498.js"><link rel="prefetch" href="/assets/js/22.5ebd8b55.js"><link rel="prefetch" href="/assets/js/23.7ce61c7b.js"><link rel="prefetch" href="/assets/js/24.9e44104a.js"><link rel="prefetch" href="/assets/js/25.8e228e57.js"><link rel="prefetch" href="/assets/js/26.497d563f.js"><link rel="prefetch" href="/assets/js/27.b013b216.js"><link rel="prefetch" href="/assets/js/28.a3b0c631.js"><link rel="prefetch" href="/assets/js/29.38024892.js"><link rel="prefetch" href="/assets/js/3.10c9a18c.js"><link rel="prefetch" href="/assets/js/30.af9f0acf.js"><link rel="prefetch" href="/assets/js/31.6ecb86cf.js"><link rel="prefetch" href="/assets/js/32.0ffea07c.js"><link rel="prefetch" href="/assets/js/33.a19168e4.js"><link rel="prefetch" href="/assets/js/34.92cfd236.js"><link rel="prefetch" href="/assets/js/35.f3902218.js"><link rel="prefetch" href="/assets/js/36.dc547c77.js"><link rel="prefetch" href="/assets/js/37.4f74995e.js"><link rel="prefetch" href="/assets/js/38.be790fff.js"><link rel="prefetch" href="/assets/js/39.8cbd959b.js"><link rel="prefetch" href="/assets/js/4.b4ea30d7.js"><link rel="prefetch" href="/assets/js/40.06538e3a.js"><link rel="prefetch" href="/assets/js/41.3993e7fa.js"><link rel="prefetch" href="/assets/js/42.ccbe0e60.js"><link rel="prefetch" href="/assets/js/43.66d4cc36.js"><link rel="prefetch" href="/assets/js/44.ea84bd3d.js"><link rel="prefetch" href="/assets/js/45.0575bedd.js"><link rel="prefetch" href="/assets/js/46.33ebacc8.js"><link rel="prefetch" href="/assets/js/47.ff128a87.js"><link rel="prefetch" href="/assets/js/48.fef3ccac.js"><link rel="prefetch" href="/assets/js/49.c525b7b2.js"><link rel="prefetch" href="/assets/js/5.9c6b78e0.js"><link rel="prefetch" href="/assets/js/50.c0518109.js"><link rel="prefetch" href="/assets/js/51.1366bb01.js"><link rel="prefetch" href="/assets/js/52.5a116fe8.js"><link rel="prefetch" href="/assets/js/53.7a598e47.js"><link rel="prefetch" href="/assets/js/54.74928571.js"><link rel="prefetch" href="/assets/js/55.bc202844.js"><link rel="prefetch" href="/assets/js/56.a1e667d9.js"><link rel="prefetch" href="/assets/js/57.aa9cf87c.js"><link rel="prefetch" href="/assets/js/58.ec09dea8.js"><link rel="prefetch" href="/assets/js/59.14ee9c1a.js"><link rel="prefetch" href="/assets/js/6.cd18b48d.js"><link rel="prefetch" href="/assets/js/60.5d8cfb7b.js"><link rel="prefetch" href="/assets/js/61.31d1b0d6.js"><link rel="prefetch" href="/assets/js/62.71ea3aca.js"><link rel="prefetch" href="/assets/js/63.acf63e83.js"><link rel="prefetch" href="/assets/js/64.c3965751.js"><link rel="prefetch" href="/assets/js/65.8cc1ef07.js"><link rel="prefetch" href="/assets/js/66.9f1574bd.js"><link rel="prefetch" href="/assets/js/67.c458a52d.js"><link rel="prefetch" href="/assets/js/68.70f932c2.js"><link rel="prefetch" href="/assets/js/69.3346a70a.js"><link rel="prefetch" href="/assets/js/7.9a0cf5d9.js"><link rel="prefetch" href="/assets/js/70.5579bade.js"><link rel="prefetch" href="/assets/js/71.31927857.js"><link rel="prefetch" href="/assets/js/72.17df1f49.js"><link rel="prefetch" href="/assets/js/73.86c609d0.js"><link rel="prefetch" href="/assets/js/74.4be915a5.js"><link rel="prefetch" href="/assets/js/75.d3bc8588.js"><link rel="prefetch" href="/assets/js/76.438110ff.js"><link rel="prefetch" href="/assets/js/77.7139f333.js"><link rel="prefetch" href="/assets/js/78.96037bb8.js"><link rel="prefetch" href="/assets/js/79.51d67b58.js"><link rel="prefetch" href="/assets/js/8.be3f9fd9.js"><link rel="prefetch" href="/assets/js/80.eee4f971.js"><link rel="prefetch" href="/assets/js/81.58e93231.js"><link rel="prefetch" href="/assets/js/9.8aa512a8.js">
<link rel="stylesheet" href="/assets/css/0.styles.2e55c9e9.css">
</head>
<body>
<div id="app" data-server-rendered="true"><div class="theme-container no-sidebar"><header class="navbar"><div class="sidebar-button"><svg xmlns="http://www.w3.org/2000/svg" aria-hidden="true" role="img" viewBox="0 0 448 512" class="icon"><path fill="currentColor" d="M436 124H12c-6.627 0-12-5.373-12-12V80c0-6.627 5.373-12 12-12h424c6.627 0 12 5.373 12 12v32c0 6.627-5.373 12-12 12zm0 160H12c-6.627 0-12-5.373-12-12v-32c0-6.627 5.373-12 12-12h424c6.627 0 12 5.373 12 12v32c0 6.627-5.373 12-12 12zm0 160H12c-6.627 0-12-5.373-12-12v-32c0-6.627 5.373-12 12-12h424c6.627 0 12 5.373 12 12v32c0 6.627-5.373 12-12 12z"></path></svg></div> <a href="/" aria-current="page" class="home-link router-link-exact-active router-link-active"><!----> <span class="site-name">Rcwl</span></a> <div class="links"><div class="search-box"><input aria-label="Search" autocomplete="off" spellcheck="false" value=""> <!----></div> <nav class="nav-links can-hide"><div class="nav-item"><a href="/guide/" class="nav-link">
Guide
</a></div><div class="nav-item"><a href="/RcwlRecipes/" class="nav-link">
Rcwl Pipelines
</a></div><div class="nav-item"><a href="/dataRecipes/" class="nav-link">
Data Recipes
</a></div><div class="nav-item"><div class="dropdown-wrapper"><button type="button" aria-label="Case studies" class="dropdown-title"><span class="title">Case studies</span> <span class="arrow down"></span></button> <button type="button" aria-label="Case studies" class="mobile-dropdown-title"><span class="title">Case studies</span> <span class="arrow right"></span></button> <ul class="nav-dropdown" style="display:none;"><li class="dropdown-item"><!----> <a href="/case_studies/scrnaseq/" class="nav-link">
scRNA-seq preprocessing
</a></li></ul></div></div><div class="nav-item"><a href="https://rworkflow.github.io/RcwlBook/" target="_blank" rel="noopener noreferrer" class="nav-link external">
Tutorials
<span><svg xmlns="http://www.w3.org/2000/svg" aria-hidden="true" focusable="false" x="0px" y="0px" viewBox="0 0 100 100" width="15" height="15" class="icon outbound"><path fill="currentColor" d="M18.8,85.1h56l0,0c2.2,0,4-1.8,4-4v-32h-8v28h-48v-48h28v-8h-32l0,0c-2.2,0-4,1.8-4,4v56C14.8,83.3,16.6,85.1,18.8,85.1z"></path> <polygon fill="currentColor" points="45.7,48.7 51.3,54.3 77.2,28.5 77.2,37.2 85.2,37.2 85.2,14.9 62.8,14.9 62.8,22.9 71.5,22.9"></polygon></svg> <span class="sr-only">(opens new window)</span></span></a></div><div class="nav-item"><a href="https://rworkflow.github.io/Rcwl/" target="_blank" rel="noopener noreferrer" class="nav-link external">
Rcwl
<span><svg xmlns="http://www.w3.org/2000/svg" aria-hidden="true" focusable="false" x="0px" y="0px" viewBox="0 0 100 100" width="15" height="15" class="icon outbound"><path fill="currentColor" d="M18.8,85.1h56l0,0c2.2,0,4-1.8,4-4v-32h-8v28h-48v-48h28v-8h-32l0,0c-2.2,0-4,1.8-4,4v56C14.8,83.3,16.6,85.1,18.8,85.1z"></path> <polygon fill="currentColor" points="45.7,48.7 51.3,54.3 77.2,28.5 77.2,37.2 85.2,37.2 85.2,14.9 62.8,14.9 62.8,22.9 71.5,22.9"></polygon></svg> <span class="sr-only">(opens new window)</span></span></a></div><div class="nav-item"><a href="https://rworkflow.github.io/RcwlPipelines/" target="_blank" rel="noopener noreferrer" class="nav-link external">
RcwlPipelines
<span><svg xmlns="http://www.w3.org/2000/svg" aria-hidden="true" focusable="false" x="0px" y="0px" viewBox="0 0 100 100" width="15" height="15" class="icon outbound"><path fill="currentColor" d="M18.8,85.1h56l0,0c2.2,0,4-1.8,4-4v-32h-8v28h-48v-48h28v-8h-32l0,0c-2.2,0-4,1.8-4,4v56C14.8,83.3,16.6,85.1,18.8,85.1z"></path> <polygon fill="currentColor" points="45.7,48.7 51.3,54.3 77.2,28.5 77.2,37.2 85.2,37.2 85.2,14.9 62.8,14.9 62.8,22.9 71.5,22.9"></polygon></svg> <span class="sr-only">(opens new window)</span></span></a></div><div class="nav-item"><a href="/about/" class="nav-link">
Contact Us
</a></div> <!----></nav></div></header> <div class="sidebar-mask"></div> <aside class="sidebar"><nav class="nav-links"><div class="nav-item"><a href="/guide/" class="nav-link">
Guide
</a></div><div class="nav-item"><a href="/RcwlRecipes/" class="nav-link">
Rcwl Pipelines
</a></div><div class="nav-item"><a href="/dataRecipes/" class="nav-link">
Data Recipes
</a></div><div class="nav-item"><div class="dropdown-wrapper"><button type="button" aria-label="Case studies" class="dropdown-title"><span class="title">Case studies</span> <span class="arrow down"></span></button> <button type="button" aria-label="Case studies" class="mobile-dropdown-title"><span class="title">Case studies</span> <span class="arrow right"></span></button> <ul class="nav-dropdown" style="display:none;"><li class="dropdown-item"><!----> <a href="/case_studies/scrnaseq/" class="nav-link">
scRNA-seq preprocessing
</a></li></ul></div></div><div class="nav-item"><a href="https://rworkflow.github.io/RcwlBook/" target="_blank" rel="noopener noreferrer" class="nav-link external">
Tutorials
<span><svg xmlns="http://www.w3.org/2000/svg" aria-hidden="true" focusable="false" x="0px" y="0px" viewBox="0 0 100 100" width="15" height="15" class="icon outbound"><path fill="currentColor" d="M18.8,85.1h56l0,0c2.2,0,4-1.8,4-4v-32h-8v28h-48v-48h28v-8h-32l0,0c-2.2,0-4,1.8-4,4v56C14.8,83.3,16.6,85.1,18.8,85.1z"></path> <polygon fill="currentColor" points="45.7,48.7 51.3,54.3 77.2,28.5 77.2,37.2 85.2,37.2 85.2,14.9 62.8,14.9 62.8,22.9 71.5,22.9"></polygon></svg> <span class="sr-only">(opens new window)</span></span></a></div><div class="nav-item"><a href="https://rworkflow.github.io/Rcwl/" target="_blank" rel="noopener noreferrer" class="nav-link external">
Rcwl
<span><svg xmlns="http://www.w3.org/2000/svg" aria-hidden="true" focusable="false" x="0px" y="0px" viewBox="0 0 100 100" width="15" height="15" class="icon outbound"><path fill="currentColor" d="M18.8,85.1h56l0,0c2.2,0,4-1.8,4-4v-32h-8v28h-48v-48h28v-8h-32l0,0c-2.2,0-4,1.8-4,4v56C14.8,83.3,16.6,85.1,18.8,85.1z"></path> <polygon fill="currentColor" points="45.7,48.7 51.3,54.3 77.2,28.5 77.2,37.2 85.2,37.2 85.2,14.9 62.8,14.9 62.8,22.9 71.5,22.9"></polygon></svg> <span class="sr-only">(opens new window)</span></span></a></div><div class="nav-item"><a href="https://rworkflow.github.io/RcwlPipelines/" target="_blank" rel="noopener noreferrer" class="nav-link external">
RcwlPipelines
<span><svg xmlns="http://www.w3.org/2000/svg" aria-hidden="true" focusable="false" x="0px" y="0px" viewBox="0 0 100 100" width="15" height="15" class="icon outbound"><path fill="currentColor" d="M18.8,85.1h56l0,0c2.2,0,4-1.8,4-4v-32h-8v28h-48v-48h28v-8h-32l0,0c-2.2,0-4,1.8-4,4v56C14.8,83.3,16.6,85.1,18.8,85.1z"></path> <polygon fill="currentColor" points="45.7,48.7 51.3,54.3 77.2,28.5 77.2,37.2 85.2,37.2 85.2,14.9 62.8,14.9 62.8,22.9 71.5,22.9"></polygon></svg> <span class="sr-only">(opens new window)</span></span></a></div><div class="nav-item"><a href="/about/" class="nav-link">
Contact Us
</a></div> <!----></nav> <!----> </aside> <main aria-labelledby="main-title" class="home"><header class="hero"><img src="./Rcwl_diagram.png" alt="hero"> <h1 id="main-title">
Rcwl
</h1> <p class="description">
R and Bioconductor toolchain for bioinformatics tools and workflows
</p> <p class="action"><a href="/guide/" class="nav-link action-button">
Quick Start →
</a></p></header> <div class="features"><div class="feature"><h2>Familar R interface</h2> <p>No need to learn a new language to write and execute bioinformatics pipelines. Hassle free software management with build-in support for Conda, Docker, Singularity.</p></div><div class="feature"><h2>Ready-to-use pipelines</h2> <p>Hundreds of pre-built and highly modularized bioinformatics tools and pipelines for common bioinformatics tasks, e.g., variant calling, read alignment, neoantigen prediction, etc.</p></div><div class="feature"><h2>Reusable genomic data</h2> <p>Workflow-based data recipes provide data reproducibility and reusability. Curated genomic data resources from public databases with full annotations and easy tracking, available on Cloud.</p></div><div class="feature"><h2>Community efforts</h2> <p>Will be providing best practice pipeline development guidelines, and benchmark datasets to facilitate community contribution of high-quality workflows.</p></div></div> <div class="theme-default-content custom content__default"></div> <div class="footer content__footer"></div></main></div><div class="global-ui"></div></div>
<script src="/assets/js/app.78d66748.js" defer></script><script src="/assets/js/2.77543436.js" defer></script><script src="/assets/js/82.710f9413.js" defer></script>
</body>
</html>