[MRG] Release 0.3.0, pyproject.toml an Citations files (#215)

* add citation file annd set proper versions for skada

* affiliation florent

* add pyporject.toml

* ste minimal setup.py for legacy pip

* select package manually

* add classifiers

* upate license

* add bibtex to readme

CITATION.cff

@@ -0,0 +1,62 @@
+# This CITATION.cff file was generated with cffinit.
+# Visit https://bit.ly/cffinit to generate yours today!
+
+cff-version: 1.2.0
+title: 'SKADA : Scikit Adaptation'
+message: >-
+  If you use this software, please cite it using the
+  metadata from this file.
+type: software
+authors:
+  - given-names: Théo
+    family-names: Gnassounou
+    affiliation: University Paris-Saclay, Inria, CEA
+  - given-names: Oleksii
+    family-names: Kachaiev
+  - given-names: Rémi
+    family-names: Flamary
+    affiliation: 'École Polytechnique, IP Paris'
+  - given-names: Antoine
+    family-names: Collas
+    affiliation: 'University Paris-Saclay, Inria, CEA'
+  - given-names: Yanis
+    family-names: Lalou
+    affiliation: 'École Polytechnique, IP Paris'
+  - given-names: Antoine
+    name-particle: de
+    family-names: Mathelin
+    affiliation: 'ENS Paris Saclay'
+  - given-names: Alexandre
+    family-names: Gramfort
+    affiliation: 'University Paris-Saclay, Inria, CEA'
+  - given-names: Ruben
+    family-names: Bueno
+    affiliation: 'École Polytechnique, IP Paris'
+  - given-names: Florent
+    family-names: Michel
+    affiliation: 'University Paris-Saclay, Inria, CEA'
+  - given-names: Apolline
+    family-names: Mellot
+    affiliation: 'University Paris-Saclay, Inria, CEA'
+  - given-names: Virginie
+    family-names: ' Loison'
+    affiliation: 'University Paris-Saclay, Inria, CEA'
+  - given-names: Ambroise
+    family-names: Odonnat
+    affiliation: Huawei Noah’s Ark Lab
+  - given-names: Thomas
+    family-names: Moreau
+    affiliation: 'University Paris-Saclay, Inria, CEA'
+repository-code: 'https://github.com/scikit-adaptation/skada/'
+url: 'https://scikit-adaptation.github.io/'
+abstract: >-
+  Python Domain Adaptation toolbow compatible with
+  scikit-learn and PyTorch
+keywords:
+  - machine learning
+  - scikit-learn
+  - pytorch
+  - domain adaptation
+license: BSD-3-Clause
+version: 0.3.0
+date-released: 2024-07-04

COPYING

@@ -1,6 +1,6 @@
 BSD 3-Clause License
 
-Copyright (c) 2023 The scikit-adaptation developers.
+Copyright (c) 2023 The SKADA developers.
 All rights reserved.
 
 Redistribution and use in source and binary forms, with or without

README.md

@@ -16,6 +16,25 @@ compatible API with the following features:
 - Classifier/Regressor and data Adapter DA algorithms compatible with scikit-learn pipelines.
 - Compatible with scikit-learn validation loops (cross_val_score, GridSearchCV, etc).
 
+**Citation**: If you use this library in your research, please cite the following reference:
+
+```
+Gnassounou T., Kachaiev O., Flamary R., Collas A., Lalou Y., de Mathelin A., Gramfort A., Bueno R., Michel F., Mellot A.,  Loison V., Odonnat A., Moreau T. (2024). SKADA : Scikit Adaptation (version 0.3.0). URL: https://scikit-adaptation.github.io/
+```
+
+or in Bibtex format :
+
+```bibtex
+@misc{gnassounou2024skada,
+author = {Gnassounou, Théo and Kachaiev, Oleksii and Flamary, Rémi and Collas, Antoine and Lalou, Yanis and de Mathelin, Antoine and Gramfort, Alexandre and Bueno, Ruben and Michel, Florent and Mellot, Apolline and  Loison, Virginie and Odonnat, Ambroise and Moreau, Thomas},
+month = {7},
+title = {SKADA : Scikit Adaptation},
+url = {https://scikit-adaptation.github.io/},
+year = {2024}
+}
+```
+
+
 ## Implemented algorithms
 
 The following algorithms are currently implemented.

pyproject.toml

@@ -0,0 +1,60 @@
+
+
+[build-system]
+requires = ["setuptools", "setuptools-scm"]
+build-backend = "setuptools.build_meta"
+
+
+[project]
+dynamic = ["version"]
+name = "skada"
+description = "A Python package for domain adaptation compatible with scikit-learn and Pytorch."
+authors = [
+        {name = "SKADA Team"},
+        ]
+license = {file = "COPYING"}
+readme = "README.md"
+dependencies = [
+    "numpy >= 1.24",
+    "scipy >= 1.10",
+    "scikit-learn >= 1.4.0",
+    "POT >= 0.9.3",
+]
+keywords = ["domain-adaptation", "scikit-learn", "pytorch", 
+            "machine learning", "deep learning"]
+classifiers=[
+  "Intended Audience :: Science/Research",
+  "Intended Audience :: Developers",
+  "License :: OSI Approved :: BSD License",
+  "Programming Language :: C",
+  "Programming Language :: Python",
+  "Topic :: Software Development",
+  "Topic :: Scientific/Engineering",
+  "Development Status :: 3 - Alpha",
+  "Operating System :: Microsoft :: Windows",
+  "Operating System :: POSIX",
+  "Operating System :: Unix",
+  "Operating System :: MacOS",
+  "Programming Language :: Python :: 3",
+  "Programming Language :: Python :: 3.9",
+  "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+  "Programming Language :: Python :: 3.12",
+]
+
+[project.urls]
+homepage = "https://scikit-adaptation.github.io/"
+documentation = "https://scikit-adaptation.github.io/"
+repository = "https://github.com/scikit-adaptation/skada/"
+
+# Optional dependencies
+[project.optional-dependencies]
+all = ["torch", "torchvision", "skorch"]
+deep = ["torch", "torchvision", "skorch"]
+subspace = ["torch"]
+
+[tool.setuptools]
+packages = ["skada"]
+
+[tool.setuptools.dynamic]
+version = {attr = "skada.version.__version__"}

setup.py

@@ -1,21 +1,3 @@
 from setuptools import find_packages, setup
 
-setup(
-    name='skada',
-    version='0',
-    description='A domain adaptation toolbox to reduce shift between domains.',
-
-    # The project's main homepage.
-    url='https://github.com/scikit-adaptation/skada',
-
-    # Author details
-    author='Théo Gnassounou',
-    author_email='[email protected]',
-
-    # Choose your license
-    license='BSD 3-Clause',
-    # What does your project relate to?
-    keywords='domain adaptation, machine learning, deep-learning',
-
-    packages=find_packages(),
-)
+setup()

skada/version.py

@@ -4,4 +4,4 @@
 #
 # License: BSD 3-Clause
 
-__version__ = "0.2"
+__version__ = "0.3.0"