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DESCRIPTION
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Package: discordant
Version: 1.19.2
Title: The Discordant Method: A Novel Approach for Differential
Correlation
Authors@R: c(person("Charlotte", "Siska", role = c("aut"),
email = "[email protected]"),
person("McGrath", "Max", role = c("aut", "cre"),
email = "[email protected]"),
person("Katerina", "Kechris", role = c("aut", "cph", "ths")))
Depends: R (>= 4.1.0)
Description: Discordant is an R package that identifies pairs of features that
correlate differently between phenotypic groups, with application to -omics
data sets. Discordant uses a mixture model that “bins” molecular feature
pairs based on their type of coexpression or coabbundance. Algorithm is
explained further in "Differential Correlation for Sequencing Data"" (Siska
et al. 2016).
Encoding: UTF-8
biocViews: ImmunoOncology, BiologicalQuestion, StatisticalMethod,
mRNAMicroarray, Microarray, Genetics, RNASeq
Suggests:
BiocStyle,
knitr,
testthat (>= 3.0.0)
Imports: Rcpp, Biobase, stats, biwt, gtools, MASS, tools, dplyr, methods, utils
License: GPL-3
URL: https://github.com/siskac/discordant
NeedsCompilation: yes
LinkingTo: Rcpp
VignetteBuilder: knitr
RoxygenNote: 7.1.2
Config/testthat/edition: 3