-----
anndata             0.10.4
matplotlib          3.8.2
mudata              0.2.3
natsort             8.4.0
pandas              2.2.0
pertpy              0.7.0
scanpy              1.9.6
session_info        1.0.0
-----

PIL                 10.2.0
absl                NA
adjustText          1.0.4
aiohttp             3.9.1
aiosignal           1.3.1
annotated_types     0.6.0
anyio               NA
arrow               1.3.0
arviz               0.17.0
asttokens           NA
async_timeout       4.0.3
attr                23.2.0
backcall            0.2.0
backoff             2.2.1
blitzgsea           NA
bs4                 4.12.3
certifi             2023.11.17
chardet             5.2.0
charset_normalizer  3.3.2
chex                0.1.7
click               8.1.7
comm                0.1.2
contextlib2         NA
croniter            NA
custom_inherit      2.4.1
cycler              0.12.1
cython_runtime      NA
dateutil            2.8.2
debugpy             1.6.7
decorator           5.1.1
decoupler           1.5.0
deepdiff            6.7.1
docrep              0.3.2
ete3                3.1.3
etils               1.6.0
exceptiongroup      1.0.4
executing           0.8.3
fastapi             0.109.0
flax                0.7.5
frozenlist          1.4.1
fsspec              2023.12.2
h5py                3.10.0
idna                3.6
igraph              0.11.3
importlib_resources NA
ipykernel           6.25.0
jax                 0.4.23
jaxlib              0.4.23
jaxopt              NA
jedi                0.18.1
joblib              1.3.2
kiwisolver          1.4.5
leidenalg           0.10.2
lightning           2.0.9.post0
lightning_cloud     0.5.61
lightning_fabric    2.1.3
lightning_utilities 0.10.1
llvmlite            0.41.1
matplotlib_inline   0.1.6
ml_collections      NA
ml_dtypes           0.3.2
mpl_toolkits        NA
mpmath              1.3.0
msgpack             1.0.7
multidict           6.0.4
multipart           0.0.6
multipledispatch    0.6.0
muon                0.1.5
numba               0.58.1
numpy               1.26.3
numpyro             0.13.2
opt_einsum          v3.3.0
optax               0.1.8
ordered_set         4.1.0
ott                 0.4.5
packaging           23.1
parso               0.8.3
patsy               0.5.6
pexpect             4.8.0
pickleshare         0.7.5
pkg_resources       NA
platformdirs        3.10.0
ply                 3.11
png                 0.20220715.0
prompt_toolkit      3.0.36
psutil              5.9.0
ptyprocess          0.7.0
pubchempy           1.0.4
pure_eval           0.2.2
pyarrow             15.0.0
pydantic            2.1.1
pydantic_core       2.4.0
pydev_ipython       NA
pydevconsole        NA
pydevd              2.9.5
pydevd_file_utils   NA
pydevd_plugins      NA
pydevd_tracing      NA
pygments            2.15.1
pynndescent         0.5.11
pyomo               6.7.0
pyparsing           3.1.1
pyro                1.8.6
pytorch_lightning   2.1.3
pytz                2023.3.post1
reportlab           4.0.9
requests            2.31.0
rich                NA
scipy               1.12.0
scvi                1.0.4
seaborn             0.13.1
six                 1.16.0
sklearn             1.4.0
skmisc              0.3.1
sniffio             1.3.0
soupsieve           2.5
sparse              0.15.1
sparsecca           0.3.1
stack_data          0.2.0
starlette           0.35.1
statsmodels         0.14.1
sympy               1.12
texttable           1.7.0
threadpoolctl       3.2.0
toolz               0.12.0
torch               2.1.2+cu121
torchgen            NA
torchmetrics        1.3.0.post0
tornado             6.3.3
toyplot             1.0.3
toytree             2.0.1
tqdm                4.66.1
traitlets           5.7.1
tree                0.1.8
typing_extensions   NA
umap                0.5.5
urllib3             2.0.7
uvicorn             0.27.0
wcwidth             0.2.5
websocket           1.7.0
websockets          12.0
xarray              2024.1.0
xarray_einstats     0.7.0
yaml                6.0.1
yarl                1.9.4
zmq                 25.1.0
zoneinfo            NA

-----
IPython             8.15.0
jupyter_client      8.6.0
jupyter_core        5.5.0
-----
Python 3.10.13 (main, Sep 11 2023, 13:44:35) [GCC 11.2.0]
Linux-5.14.21-150400.24.97-default-x86_64-with-glibc2.31
-----
Session information updated at 2024-01-25 11:37