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new picai seg#310

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itaijj merged 67 commits intomasterBiomedSciAI/fuse-med-ml:masterfrom picai__segBiomedSciAI/fuse-med-ml:picai__segCopy head branch name to clipboardMay 28, 2023

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Commits

Commits on May 7, 2023

• new picai seg

  

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  8841ce5

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• black flake

  

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• update

  

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• fi mypy

  

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• mypy

  

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Commits on May 8, 2023

• trying to make dataset work in new fuse

  

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• black flake

  

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• black

  

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Commits on May 9, 2023

• bring back augmentations

  

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• black

  

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Commits on May 14, 2023

• added tests and rename folder

  

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• conf change

  

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• flake

  

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• updte test conf

  

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• remove local conf

  

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  84ebdbc

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Commits on May 15, 2023

• fix test

  

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• flake

  

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Commits on May 16, 2023

• a100 and liam suggested change

  

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• blk

  

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• small fix

  

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Commits on May 17, 2023

• first PR fix

  

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• second PR fix

  

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• typo

  

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• blk

  

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• fix eval with dice metric, issues with dumping results

  

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• fix eval with dice metric, issues with dumping results

  

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  87adec8

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• flake

  

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• blk again

  

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Commits on May 18, 2023

• change cfg ovveride

  

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• changed to whole gland segmentation

  

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  693658a

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• fix eval

  

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  b828e8a

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Commits on May 22, 2023

• fix eval

  

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  4ec336a

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Commits on May 24, 2023

• fixing moshiko PR review

  

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  fea5332

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Commits on May 28, 2023

• new picai seg

  

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  27b9050

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• black flake

  

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  1dc98bb

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• update

  

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• fi mypy

  

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• mypy

  

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• trying to make dataset work in new fuse

  

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• black flake

  

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• black

  

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• bring back augmentations

  

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• black

  

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• added tests and rename folder

  

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• conf change

  

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• flake

  

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• updte test conf

  

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• remove local conf

  

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  c2ca3cc

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• fix test

  

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  042b0af

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• flake

  

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• a100 and liam suggested change

  

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• blk

  

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• small fix

  

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  9e7edd5

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• first PR fix

  

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• second PR fix

  

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  f46449d

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• typo

  

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• blk

  

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• fix eval with dice metric, issues with dumping results

  

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• fix eval with dice metric, issues with dumping results

  

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• flake

  

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• blk again

  

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• change cfg ovveride

  

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  5ad1d6b

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• changed to whole gland segmentation

  

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  e486803

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• fix eval

  

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• fix eval

  

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  e579b81

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• fixing moshiko PR review

  

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• Merge branch 'picai__seg' of github.com:BiomedSciAI/fuse-med-ml into picai__seg

  

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