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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 179 45

  2. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 107 45

  3. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 107 12

  4. slurm-examples slurm-examples Public

    examples of using slurm in life sciences workflows using posix file systems and object storage

    Shell 40 14

  5. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 40 6

  6. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    Python 38 45

Repositories

Showing 10 of 606 repositories
  • rnaseq-de-viewer-marimo Public

    View for RNAseq-based Differential Expression Analysis Results using Marimo

    FredHutch/rnaseq-de-viewer-marimo’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 25, 2025
  • wdl-unit-tests Public

    Collection of simple WDL's for use in unit testing of WDL-centric software such as PROOF

    FredHutch/wdl-unit-tests’s past year of commit activity
    WDL 0 MIT 0 27 7 Updated Feb 25, 2025
  • gig-map Public

    Build a map of genes present across a set of microbial genomes

    FredHutch/gig-map’s past year of commit activity
    Python 14 4 0 0 Updated Feb 25, 2025
  • ichorCurate Public
    FredHutch/ichorCurate’s past year of commit activity
    Python 2 0 1 0 Updated Feb 24, 2025
  • VISCtemplates Public

    Tools for writing reproducible reports at VISC

    FredHutch/VISCtemplates’s past year of commit activity
    R 6 2 36 5 Updated Feb 24, 2025
  • trm-calculator Public

    TRM R Shiny app repo

    FredHutch/trm-calculator’s past year of commit activity
    R 1 MIT 0 0 0 Updated Feb 24, 2025
  • pg-guide Public
    FredHutch/pg-guide’s past year of commit activity
    Python 0 0 0 0 Updated Feb 24, 2025
  • gimap Public

    Genetic Interaction MAPping for dual target CRISPR screens

    FredHutch/gimap’s past year of commit activity
    HTML 0 CC0-1.0 0 6 1 Updated Feb 24, 2025
  • integrationsites Public

    The Integration Sites web application is a bioinformatics tool to detect the integration sites of HIV into the human genome

    FredHutch/integrationsites’s past year of commit activity
    JavaScript 0 0 0 0 Updated Feb 24, 2025
  • shiny-and-leaflet Public
    FredHutch/shiny-and-leaflet’s past year of commit activity
    R 0 0 0 0 Updated Feb 24, 2025
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