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More added for biomodels to v2dev
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@pgleeson
pgleeson committed Jan 30, 2025
1 parent a7bd102 commit a39c5ee
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Showing 6 changed files with 6,875 additions and 77 deletions.
5 changes: 4 additions & 1 deletion libraries/client/biomodels_info.py
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Original file line number Diff line number Diff line change
Expand Up @@ -49,7 +49,10 @@ def get_model_info(model_id):
try:
info = get_model_info(model_id)
if info["curationStatus"] != "CURATED":
print(" **** Not adding, as curationStatus = %s" % info["curationStatus"])
print(
" **** Not adding, as curationStatus = %s"
% info["curationStatus"]
)
else:
model_name = info["name"]
print(f" {model_id}: \n {pprint.pformat(info['name'])}--")
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88 changes: 44 additions & 44 deletions libraries/client/cached_info/biomodels.json
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Original file line number Diff line number Diff line change
Expand Up @@ -139971,17 +139971,17 @@
}
],
"Modeller": [
{
"affiliation": "Newcastle University",
"email": "[email protected]",
"external": false,
"name": "Graham Smith"
},
{
"affiliation": "EMBL - European Bioinformatics Institute (EBI)",
"email": "[email protected]",
"external": false,
"name": "administrator"
},
{
"affiliation": "Newcastle University",
"email": "[email protected]",
"external": false,
"name": "Graham Smith"
}
]
},
Expand Down Expand Up @@ -180092,17 +180092,17 @@
"BIOMD0000000601": {
"contributors": {
"Modeller": [
{
"affiliation": "EMBL - European Bioinformatics Institute (EBI)",
"email": "[email protected]",
"external": false,
"name": "administrator"
},
{
"affiliation": "Centro de Investigacion y de Estudios Avanzados del Instituto Politecnico Nacional (CINVESTAV-IPN), Unidad Monterrey, Apodaca, Nuevo Leon, Mexico.",
"email": "[email protected]",
"external": false,
"name": "Norma Citlalcue Perez-Rosas"
},
{
"affiliation": "EMBL - European Bioinformatics Institute (EBI)",
"email": "[email protected]",
"external": false,
"name": "administrator"
}
]
},
Expand Down Expand Up @@ -184322,17 +184322,17 @@
}
],
"Modeller": [
{
"affiliation": "EMBL-EBI",
"email": "[email protected]",
"external": false,
"name": "Thawfeek Varusai"
},
{
"affiliation": "EMBL - European Bioinformatics Institute (EBI)",
"email": "[email protected]",
"external": false,
"name": "administrator"
},
{
"affiliation": "EMBL-EBI",
"email": "[email protected]",
"external": false,
"name": "Thawfeek Varusai"
}
]
},
Expand Down Expand Up @@ -187069,17 +187069,17 @@
}
],
"Modeller": [
{
"affiliation": "EMBL - European Bioinformatics Institute (EBI)",
"email": "[email protected]",
"external": false,
"name": "administrator"
},
{
"affiliation": "EMBL-EBI",
"email": "[email protected]",
"external": false,
"name": "Thawfeek Varusai"
},
{
"affiliation": "EMBL - European Bioinformatics Institute (EBI)",
"email": "[email protected]",
"external": false,
"name": "administrator"
}
]
},
Expand Down Expand Up @@ -198427,19 +198427,19 @@
}
],
"Modeller": [
{
"affiliation": "Department of Biochemistry, University of Oxford, OX1 3QU Oxford, United Kingdom; [email protected] [email protected].",
"email": "[email protected]",
"external": false,
"name": "Frank Stefan Heldt",
"orcid": "0000-0002-9276-5013"
},
{
"affiliation": "European Molecular Biology Laboratory-European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.",
"email": "[email protected]",
"external": false,
"name": "Rahuman S Malik-Sheriff",
"orcid": "0000-0003-0705-9809"
},
{
"affiliation": "Department of Biochemistry, University of Oxford, OX1 3QU Oxford, United Kingdom; [email protected] [email protected].",
"email": "[email protected]",
"external": false,
"name": "Frank Stefan Heldt",
"orcid": "0000-0002-9276-5013"
}
]
},
Expand Down Expand Up @@ -256905,18 +256905,18 @@
"name": "Mohammad Umer Sharif Shohan",
"orcid": "0000-0003-3985-2879"
},
{
"affiliation": "National Center for cell science",
"email": "[email protected]",
"external": false,
"name": "Bhavnita Soni"
},
{
"affiliation": "EMBL-EBI",
"email": "[email protected]",
"external": false,
"name": "Krishna Kumar Tiwari",
"orcid": "0000-0002-3699-0937"
},
{
"affiliation": "National Center for cell science",
"email": "[email protected]",
"external": false,
"name": "Bhavnita Soni"
}
]
},
Expand Down Expand Up @@ -314727,19 +314727,19 @@
}
],
"Modeller": [
{
"affiliation": "EMBL Heidelberg",
"email": "[email protected]",
"external": false,
"name": "Jan Rombouts",
"orcid": "0000-0003-4135-0771"
},
{
"affiliation": "EMBL-EBI",
"email": "[email protected]",
"external": false,
"name": "Krishna Kumar Tiwari",
"orcid": "0000-0002-3699-0937"
},
{
"affiliation": "EMBL Heidelberg",
"email": "[email protected]",
"external": false,
"name": "Jan Rombouts",
"orcid": "0000-0003-4135-0771"
}
]
},
Expand Down
10 changes: 5 additions & 5 deletions libraries/client/cached_info/osb_gh.json
View file
Original file line number Diff line number Diff line change
Expand Up @@ -213011,7 +213011,7 @@
},
"private": false,
"pulls_url": "https://api.github.com/repos/OpenSourceBrain/OSBv2/pulls{/number}",
"pushed_at": "2025-01-27T18:31:16Z",
"pushed_at": "2025-01-29T11:09:36Z",
"releases_url": "https://api.github.com/repos/OpenSourceBrain/OSBv2/releases{/id}",
"size": 46704,
"ssh_url": "[email protected]:OpenSourceBrain/OSBv2.git",
Expand Down Expand Up @@ -214531,8 +214531,8 @@
"name": "SBMLShowcase",
"node_id": "MDEwOlJlcG9zaXRvcnk5ODMzNTU3",
"notifications_url": "https://api.github.com/repos/OpenSourceBrain/SBMLShowcase/notifications{?since,all,participating}",
"open_issues": 10,
"open_issues_count": 10,
"open_issues": 9,
"open_issues_count": 9,
"owner": {
"avatar_url": "https://avatars.githubusercontent.com/u/1565478?v=4",
"events_url": "https://api.github.com/users/OpenSourceBrain/events{/privacy}",
Expand Down Expand Up @@ -214563,9 +214563,9 @@
},
"private": false,
"pulls_url": "https://api.github.com/repos/OpenSourceBrain/SBMLShowcase/pulls{/number}",
"pushed_at": "2025-01-29T09:39:30Z",
"pushed_at": "2025-01-29T10:28:03Z",
"releases_url": "https://api.github.com/repos/OpenSourceBrain/SBMLShowcase/releases{/id}",
"size": 2049,
"size": 2045,
"ssh_url": "[email protected]:OpenSourceBrain/SBMLShowcase.git",
"stargazers_count": 1,
"stargazers_url": "https://api.github.com/repos/OpenSourceBrain/SBMLShowcase/stargazers",
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