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fix expected output of PullSingularityContainers process #672

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Oct 24, 2018
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fix expected output of PullSingularityContainers process #672

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de98795
fix expected output of PullSingularityContainers process
maxulysse Oct 23, 2018
f071960
update CHANGELOG [skip ci]
maxulysse Oct 23, 2018
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -14,6 +14,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.
### `Fixed`

- [#665](https://github.com/SciLifeLab/Sarek/pull/665) - Input bam file now has always the same name (whether it is from a single fastq pair or multiple) in the MarkDuplicates process, so metrics too
- [#672](https://github.com/SciLifeLab/Sarek/pull/672) - process `PullSingularityContainers` from `buildContainers.nf` now expect a file with the correct `.simg` extension for singularity images, and no longer the `.img` one.

## [2.2.1] - 2018-10-04

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2 changes: 1 addition & 1 deletion buildContainers.nf
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Expand Up @@ -92,7 +92,7 @@ process PullSingularityContainers {
val container from singularityContainers

output:
file("${container}-${params.tag}.img") into imagePulled
file("${container}-${params.tag}.simg") into imagePulled

when: params.singularity

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