add plate 3 analysis without run #9
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
|
Check out this pull request on See visual diffs & provide feedback on Jupyter Notebooks. Powered by ReviewNB |
|
Good PR. Please check in with Dave about the |
MikeLippincott
approved these changes
Apr 14, 2023
d33bs
reviewed
Apr 14, 2023
|
@d33bs @MikeLippincott Thank you both for the review! I will now be merging this and then running the analysis on |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
In this PR, I create the setup for running plate 3 with a new analysis pipeline specifically for the next two plates (3 and 3').
I do not run this pipeline in this PR since running on the Mac w/ M2 Pro Chip is not fast and will take a longer time than running on the Linux machine. The next PR will be running the analysis and running CytoTable to merge single cells.