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Reordered the arguments to match the script
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muffato authored and Vedanth-Ramji committed Jul 8, 2024
1 parent 7096cf2 commit bc6b82f
Showing 1 changed file with 9 additions and 9 deletions.
18 changes: 9 additions & 9 deletions modules/nf-core/argnorm/meta.yml
Original file line number Diff line number Diff line change
Expand Up @@ -29,30 +29,30 @@ input:
description: ARG annotation output
pattern: "*.tsv"

- db:
type: string
description: Database used for ARG annotation
pattern: "sarg|ncbi|resfinder|deeparg|megares|argannot|resfinderfg"

- tool:
type: string
description: ARG annotation tool used
pattern: "argsoap|abricate|deeparg|resfinder|amrfinderplus"

- db:
type: string
description: Database used for ARG annotation
pattern: "sarg|ncbi|resfinder|deeparg|megares|argannot|resfinderfg"

output:
- meta:
type: map
description: |
Groovy Map containing sample information
e.g. `[ id:'sample1', single_end:false ]`
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"
- tsv:
type: file
description: Normalized argNorm output
pattern: "*.tsv"
- versions:
type: file
description: File containing software versions
pattern: "versions.yml"

authors:
- "@Vedanth-Ramji"
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