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Refactor Sentieon#5945

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edmundmiller merged 12 commits intomasternf-core/modules:masterfrom refactor/sentieonnf-core/modules:refactor/sentieonCopy head branch name to clipboardJul 19, 2024

+204-316

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Commits on Jul 17, 2024

• refactor: Clean up the logic and let Sentieon figure it out

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  e7db471

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• refactor: Remove Sentieon license server IP check

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• fix: Add a -n

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• Try accessing secrets in the module?

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• fix: Use Nextflow for if statement

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• update snapshot

  

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• update snapshot

  

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• extend logic to all main.nf

  

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• ci: Add Sentieon logic to pytest-workflow

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• test(sentieon): Add env section to every config

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Commits on Jul 19, 2024

• Revert "ci: Add Sentieon logic to pytest-workflow"

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• test: Remove pytest_modules for sentieon

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