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Fix schema (#1797)
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Glob were present in igenomes.config but not in the schema which is
preventing from using the globs when not using igenomes.
close #1785 

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maxulysse authored Feb 12, 2025
1 parent dfb2d15 commit 78e15e6
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2 changes: 2 additions & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -18,6 +18,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

### Fixed

- [1797](https://github.com/nf-core/sarek/pull/1797) - Use `file-path-pattern` over `file-path` to hanlde glob for `known_indels` and `known_indels_tbi` to fix [1785](https://github.com/nf-core/sarek/issues/1785)

### Removed

### Dependencies
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4 changes: 2 additions & 2 deletions nextflow_schema.json
Original file line number Diff line number Diff line change
Expand Up @@ -706,7 +706,7 @@
"known_indels": {
"type": "string",
"fa_icon": "fas fa-copy",
"format": "file-path",
"format": "file-path-pattern",
"exists": true,
"mimetype": "text/plain",
"description": "Path to known indels file.",
Expand All @@ -715,7 +715,7 @@
"known_indels_tbi": {
"type": "string",
"fa_icon": "fas fa-copy",
"format": "file-path",
"format": "file-path-pattern",
"exists": true,
"mimetype": "text/plain",
"description": "Path to known indels file index.",
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