Improvment on preprocessing #264
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FriederikeHanssen
approved these changes
Aug 6, 2020
| samtools index ${bam} | ||
| [ ! -f ${prefix}.bam ] && ln -s ${bam} ${prefix}.bam | ||
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| samtools index ${prefix}.bam | ||
| """ |
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Is this from Harshil's modules?
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I got inspired from fastqc module
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Can we merge? Think there is a fix in your code, that I need somewhere in the VariantCalling and copying out one thing has lead to a cascade of changes. Much rather merge und fetch this code |
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