Update README.md #850
Closed
Update README.md #850
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
addresses #824
indicates the necessity to add all required software to the path. This is important for pipelines with multiple environments.
as suggested by @ewels in #824 (comment)
* Use ansi colours for the default values and filled values in the group select view of params (#816) * Add to group select prompt a warning that a value is required, if not yet filled and no default
Better UI for command line launch
Closes #299 Also bumped minimum Rich version as latest release is a bug hotfix.
Also move the AWS workflow env vars to the top level so that they work for any additional job steps added by developers.
Also a minor bugfix for fixing files with changes - use shutil.copy() instead of doing it manually
Need 2 spaces to indent, not 1
Update PULL_REQUEST_TEMPLATE.md
This config has been moved to nf-core/configs and is no longer referenced in nextflow.config, but the template sync doesn't seem to pick up that the config file should be deleted.
Linting: Check that aws.config is deleted
…n 3.6 Automated tests are amazing.. Would never have found this otherwise!
Lint: new files_unchanged test to check that files are not modified from the template
Fix tyop
Replacing Docker by BioContainers. That way we cover both Docker and Singularity
maxulysse
added a commit
that referenced
this pull request
Feb 12, 2021
Replace Docker by BioContainers, that should cover both Docker and Singularity. repalce previous PR #850 that was made to `dev`
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Replacing Docker by BioContainers.
That way we cover both Docker and Singularity
PR checklist
CHANGELOG.mdis updateddocsis updated