Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix query causing duplicated items in response #108

Merged
merged 3 commits into from
Nov 20, 2022

Conversation

const8ine
Copy link
Member

No description provided.

@const8ine const8ine marked this pull request as draft November 12, 2022 03:07
@const8ine const8ine marked this pull request as ready for review November 16, 2022 22:44
@const8ine const8ine merged commit f86caca into develop Nov 20, 2022
const8ine pushed a commit that referenced this pull request Nov 20, 2022
* Noissue. Fix query causing duplicated items in response

* Fix quotes

* Fix. Correct the query
const8ine pushed a commit that referenced this pull request Mar 31, 2023
* Changed api/gene/symbols output format and updated documentation

* Removed relevant print()

* fix: for Russian locale return lang_en if lang_ru column is empty

* OG-936: fix empty response for measurementMethod field

* Add updated datasets with missing experiments (#107)

* New datasets with studies that were not added

* Correct dataset for blue form

* Correct dataset for pink form

* Rename new datasets

* Change the names of the datasets

* Update dataset with missing experiments

* Noissue. Do not change timestamp when gene was created

* Noissue. Don't perform delete in longevity associations script since now

* Noissue. Update confidence_level.tsv dataset

* Updated first query assignment to avoid duplicates

* OG-943: Change logic and refactor code

* Fix query causing duplicated items in response (#108)

* Noissue. Fix query causing duplicated items in response

* Added join in _form, changed filter behavior, deleted a test router

* Update README.md

* #115. Remove GROUP BY

* OG-943. Revert and fix script, update dataset, fix output (#112)

* Revert OG-943

* Bring back changes from OG-391, add check for existing mechanism

* OG-943. Fix script output, add comments

* Update Hallmarks of Aging and Go-terms in a dataset

* OG-943. Fix query where value were instead of id

* OG-943. Fix. Only select the result with an identical GO-term name

* OG-943. Fix. Consider GO-term children in SQL query for endpoint

* Noissue. Update hallmarks dataset

* Add info about DB dump

* OG-949. Output manually bound aging mechanisms (#119)

* Altered AgingMechanisms filter in GeneCommon, GeneSearchInput

* Altered fields for AgingMechanism model, added filter for additional UUIDs (in str format)

* Altered AgingMechanisms filter in GeneCommon, GeneSearchInput

* Altered fields for AgingMechanism model, added filter for additional UUIDs (in str format)

* Updated agingMechanisms SQL request, added @lang@ in proteinClasses

* Updated gene/search endpoint: avoid duplicates in agingMechanisms response

* Removed duplicates from aginMechanism response in gene/{id_or_symbol}, added sorting

---------

Co-authored-by: psnewbee <[email protected]>
Co-authored-by: Pavel <[email protected]>

* OG-957. Fix filter byConservativeIn (#121)

* Created presenters/taxon.py, added TaxonDAO

* Added TaxonDAO

* Created gene/taxon endpoint

* OG-957. Fix pandas import and add check if agingMechanism exists for gene (#123)

---------

Co-authored-by: psnewbee <[email protected]>
Co-authored-by: anthony <[email protected]>
Co-authored-by: Pavel <[email protected]>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants