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sync with develop #1

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boegel
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@boegel boegel commented Mar 13, 2018

@reedts for easybuilders#5955

This is a simple merge with current develop, no changes we made to the files you're contributing.

We should look into providing an option in eb for this, something like eb --sync-pr 5955:develop...

RvDijk and others added 30 commits January 29, 2018 10:32
…rn-0.2.0-intel-2017b-Python-2.7.14.eb, Biopython-1.70-intel-2017b-Python-2.7.14.eb, Pysam-0.14-intel-2017b-Python-2.7.14.eb, Pillow-5.0.0-intel-2017b-Python-2.7.14.eb
…r_TensorFlow160

{lib}[foss/2018a] TensorFlow v1.6.0 w/ Python 3.6.4 + Bazel v0.11.0
Perl: add Math::CDF perl module
boegel and others added 24 commits March 12, 2018 10:18
…80306173349_new_pr_MaSuRCA324

{bio}[foss/2018a] MaSuRCA v3.2.4
…r_XCfun20180122

{tools}[intel/2017b] XCfun v20180122
…r_Qt55101

{devel,vis}[foss/2018a] Qt5 v5.10.1, libGLU v9.0.0
bump hwloc dep for OpenMPI 2.1.2 that is part of iomkl/2018a to v1.11.8
…r_GraphicsMagick1328

{tools,vis}[foss/2018a] GraphicsMagick v1.3.28, Ghostscript v9.22
…t_dep

use gettext 0.19.8.1 on top of libxml2 2.9.7 as dep for git built with foss/2018a
…r_Oases0208

{bio}[intel/2017b] Oases v0.2.08 -kmer_101
…y_check

add custom sanity_check_paths for GraphicsMagick consistently
…heck

add custom sanity_check_paths to recent Ghostscript easyconfigs
…hain_generation

add test to ensure there's only one variant for each dependency in dep graph of easyconfigs using particular toolchains (REVIEW)
…script_2018a_libjpegturbo_153

use latest libjpeg-turbo 1.5.3 in GraphicsMagick/Ghostscript foss/2018a easyconfigs
@reedts reedts merged commit 87f3a7b into reedts:20180306125256_new_pr_cairo11412 Mar 15, 2018
@boegel boegel deleted the 20180306125256_new_pr_cairo11412 branch March 15, 2018 10:03
reedts pushed a commit that referenced this pull request Jul 27, 2018
(style) fixes for udocker easyconfig file
reedts pushed a commit that referenced this pull request Jul 27, 2018
fixes for R-3.5.0-iomkl-2018a-X11-20180131.eb
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8 participants